Databases

As part of our mission to support collaborative neuroscience research and data-driven discovery, this page provides a curated list of publicly accessible databases spanning both image-based and non-image-based data collections. These resources include neuroimaging datasets, gene expression repositories, clinical and behavioral data sources, and more. Whether you're developing computational models, exploring brain connectivity, or analyzing genomic signatures, the databases listed here offer a starting point for reproducible and scalable research.

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Image-Based Data Collections

These datasets contain raw or processed neuroimaging data such as MRI, fMRI, PET, or high-resolution anatomical scans. They are commonly used for brain mapping, segmentation, machine learning models, and structural-functional connectivity studies.

NSCLC-RADIOMICS-INTEROBSERVER1
Primary Focus / Research Purpose: Lung Cancer
Data Modalities: Unknown
Key Molecular or Clinical Insights:
  • DOI: https://doi.org/10.1038/ncomms5006
  • DOI: https://commons.datacite.org/doi.org/10.7937/tcia.2019.cwvlpd26
  • DOI: https://doi.org/10.7937/tcia.2019.cwvlpd26
  • Description: DOI:10.7937/tcia.2019.cwvlpd26|Data Citation Required|1.8k Views|10 Citations|Image Collection This collection contains clinical data and computed tomography (CT) from 22 non-small cell lung cancer (
  • Views: 1.8k Views
  • Citations: 10 Citations
HNSCC-3DCT-RT
Primary Focus / Research Purpose: Unknown
Data Modalities: Unknown
Key Molecular or Clinical Insights:
  • DOI: http://doi.org/10.7937/K9/TCIA.2018.13upr2xf
  • DOI: https://doi.org/10.1002/mp.13460
  • DOI: https://commons.datacite.org/doi.org/10.7937/K9/TCIA.2018.13upr2xf
  • Description: DOI:10.7937/K9/TCIA.2018.13upr2xf|Data Citation Required|1.6k Views|18 Citations|Image Collection Researchers will have the unique opportunity to visualize how head-and-neck squamous cell carcinoma (
  • Views: 1.6k Views
  • Citations: 18 Citations
QIN-HEADNECK
Primary Focus / Research Purpose: Head And Neck
Data Modalities: Unknown
Key Molecular or Clinical Insights:
  • DOI: https://doi.org/10.7937/K9/TCIA.2015.K0F5CGLI
  • DOI: https://commons.datacite.org/doi.org/10.7937/K9/TCIA.2015.K0F5CGLI
  • DOI: https://doi.org/10.7717/peerj.2057
  • Description: DOI:10.7937/K9/TCIA.2015.K0F5CGLI|Data Citation Required|1.5k Views|23 Citations|Image Collection This collection is a set of head and neck cancer patients' multiple positron emission tomography/comp
  • Views: 1.5k Views
  • Citations: 23 Citations

Non-Image Based Data Collections

This section includes datasets that do not primarily consist of images but are crucial in neuroscience research. These include gene expression profiles, electrophysiological data, molecular markers, clinical assessments, and subject metadata often used alongside imaging data.

NCI Cancer Model Development for the Human Cancer Model Initiative
Primary Focus / Research Purpose: Synovial-like Neoplasms, Mature T- and NK-Cell Lymphomas, Complex Mixed and Stromal Neoplasms, Squamous Cell Neoplasms, Neuroepitheliomatous Neoplasms, Soft Tissue Tumors and Sarcomas, NOS, Ductal and Lobular Neoplasms, Blood Vessel Tumors, Transitional C
Data Modalities: Genomic, Clinical, Biospecimen
Key Molecular or Clinical Insights:
  • Cases: 804
  • Files: 43656
  • Primary Site: Colon, Thyroid gland, Other and unspecified parts of tongue, Connective, subcutaneous and other soft tissues, Kidney, Bladder, Liver and intrahepatic bile ducts, Lymph nodes, Stomach, Bronchus and lung, Small intestine, Other and ill-defined sites, Rectosigmoid junction, Other and unspecified parts of mouth, Bones, joints and articular cartilage of other and unspecified sites, Corpus uteri, Pancreas, Eye and adnexa, Uterus, NOS, Esophagus, Unknown, Larynx, Adrenal gland, Nasal cavity and middle ear, Other and unspecified parts of biliary tract, Rectum, Skin, Breast, Ovary, Hematopoietic and reticuloendothelial systems, Gallbladder, Brain
Brain Lower Grade Glioma
Primary Focus / Research Purpose: Gliomas
Data Modalities: Genomic, Clinical, Biospecimen
Key Molecular or Clinical Insights:
  • Cases: 516
  • Files: 33453
  • Primary Site: Brain
Skin Cutaneous Melanoma
Primary Focus / Research Purpose: Nevi and Melanomas
Data Modalities: Genomic, Clinical, Biospecimen
Key Molecular or Clinical Insights:
  • Cases: 470
  • Files: 28203
  • Primary Site: Colon, Connective, subcutaneous and other soft tissues, Liver and intrahepatic bile ducts, Lymph nodes, Spinal cord, cranial nerves, and other parts of central nervous system, Bronchus and lung, Small intestine, Other and ill-defined sites, Vagina, Bones, joints and articular cartilage of other and unspecified sites, Vulva, Parotid gland, Corpus uteri, Retroperitoneum and peritoneum, Adrenal gland, Nasal cavity and middle ear, Skin, Breast, Anus and anal canal, Brain

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